miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|125535432|gb|EL548126.1|EL548126 CTAACGCCGCTGTTGATGCGTAGCAGGTCTACCGCCCAATAGCCTCTAACCATCCAATCTGTTCACATGGAAACGATATA
GATTTCCTAGGTCGCCGTTGAACATATAGGTGTTGTTATTTATGTTGATGTTTTTACCATTTTAAGTGCGTTCTCAAGAT
CCAAACCAGAGGCGCGTTCTGGACTGCGCCACGCGTCAGCGTCGCTTGGTCAGACAGTTAGAAGCTCTCGAAAAAGACAA
CTTTCAAGATGACCCTCACGCCAGCTTACCACAGCAACTAGCTAAGAGACTACCACAGTTTGATGACAGCAATGAATCTG
GCAAGAAGAGAAAAAAGACACGGGGAGATCATTTTAAACTTAGATTTCGAAAGAATTTCCAAGCTTTGCTGGAGGAGGAG
GACCTGAGCGGTACAGAAGGACCGAACTACCTGACGGCATGCGCGGAGTCGTCAAAACTGCCCCAGCGCAACTTCTGCAC
GGTGTGCGGTTTCCCGTCCCACTACAAGTGCGTGTCCTGCGGGGCGCGCTACTGCTGTGTCCGTTGCTTGGGAACACATC
ACGAGACCAGATGTCTCAAGTGGACTGTGTGACCAACCCAGCTTTTACCTGTGAACCACTTCAGTCTGCAGCTTGTATAT
ATAAGGGTCTGTGTGCAGCGTCTTGTTCGGGAAATTTGGGAGGGGGAGGGGGGGCAACACATCACTCTCAAATGAACTCC
CAGCCTGACCAGGGGCCTGTTCCATAAAGCTAGTTTACCGAATAAGACGGGCTCATGTCAGGGTAAGTAACTCACATGAA
CTTGGCTTATTCTGTAAACTCGCTTTAGGAAGC




Most similar to sp|Q8R331|ZNHI1_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8R331|ZNHI1_MOUSE Zinc finger HIT domain-containing protein 1
           OS=Mus musculus GN=Znhit1 PE=2 SV=1
          Length = 154

 Score =  249 bits (635), Expect = 2e-65
 Identities = 119/148 (80%), Positives = 126/148 (85%)
 Frame = +2

Query: 146 VRSQDPNQRRVLDCATRQRRLVRQLEALEKDNFQDDPHASLPQQLAKRLPQFDDSNESGK 325
           VRSQDP QRRVLD A RQRR+ RQLEALE DNFQDDPHA LPQ L KRLPQFDD  ++GK
Sbjct: 8   VRSQDPGQRRVLDRAARQRRINRQLEALENDNFQDDPHAGLPQ-LGKRLPQFDDDADTGK 66

Query: 326 KRKKTRGDHFKLRFRKNFQALLEEEDLSGTEGPNYLTACAESSKLPQRNFCTVCGFPSHY 505
           K+KKTRGDHFKLRFRKNFQALLEE++LS +EGPNYLTACA     PQR FC VCGFPS Y
Sbjct: 67  KKKKTRGDHFKLRFRKNFQALLEEQNLSASEGPNYLTACAGPPSRPQRPFCAVCGFPSPY 126

Query: 506 KCVSCGARYCCVRCLGTHHETRCLKWTV 589
            CVSCGARYC VRCLGTH ETRCLKWTV
Sbjct: 127 TCVSCGARYCTVRCLGTHQETRCLKWTV 154